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X-WR-CALDESC:Events for Graduate School EPS
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DTSTART;TZID=Europe/Amsterdam:20260612T110000
DTEND;TZID=Europe/Amsterdam:20260612T120000
DTSTAMP:20260604T232132Z
CREATED:20260413T090348Z
LAST-MODIFIED:20260604T232132Z
UID:5529-1781262000-1781265600@graduateschool-eps.info
SUMMARY:Meet and Greet with PLOS Biology Editor Melissa Vazquez Hernandez
DESCRIPTION:Have you ever wondered what a typical workday looks like for a journal editor? \nMeet Melissa Vazquez Hernandez\, an editor at PLOS Biology. She specializes in microbiology—including virology\, mycology\, and parasitology—as well as immunology. In this talk\, she will share insights into her career transition from being a scientist to becoming an editor\, and what her role involves behind the scenes. \nDate: 12 June 2026 \nTime: 11:00 – 12:00 \nLocation: B0621 in Forum\, Wageningen Campus \nAbout Melissa Vazquez Hernandez \nRaised in a small city in Mexico\, Melissa received a BSc in Biotechnology from the Autonomous University of Queretaro where she studied the enzymatic capacities of the fungus Aspergillus. After graduating she moved to Mexico City to do a MSc in Biochemistry at the National Autonomous University of Mexico on Streptomyces and genome mining. She then did her PhD at Ruhr University Bochum in Germany under the supervision of Julia Bandow and Ken Keiler\, studying the physiology of gram-positive and gram-negative bacteria and novel antimicrobials. After a year as a postdoc\, she switched careers and joined the PLOS Biology team in December 2023. \n 
URL:https://graduateschool-eps.info/event/meet-and-greet-with-plos-biology-editor-melissa-vazquez-hernandez/
LOCATION:Wageningen Campus\, Droevendaalsesteeg 4\, Wageningen\, Gelderland\, 6708 PB\, Netherlands
CATEGORIES:EPS courses,Recurring events incidental
ATTACH;FMTTYPE=image/jpeg:https://graduateschool-eps.info/wp-content/uploads/2026/04/OIP.jpg
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BEGIN:VEVENT
DTSTART;TZID=Europe/Amsterdam:20260528T120000
DTEND;TZID=Europe/Amsterdam:20260529T220000
DTSTAMP:20260604T232000Z
CREATED:20260413T091453Z
LAST-MODIFIED:20260604T232000Z
UID:5532-1779969600-1780092000@graduateschool-eps.info
SUMMARY:KWS Company Visit
DESCRIPTION:KWS company visit \nOn May 29\, 2026\, all areas of research and development at KWS in Einbeck will open their doors to young students and scientists. This will allow them to get an insight into all facets of research and development at one of the world’s leading plant breeding companies. Visitors will discover the exciting interrelationships in the development of new varieties. Around 2\,000 colleagues from a wide range of disciplines work in research and development at KWS worldwide\, working on solutions for sustainable agriculture.\nWould you like to join the company visit to KWS? We will leave on the 28th May around lunch time\, and stay over at a youth hostel. On the 29th\, we will visit KWS and leave Einbeck around 16:30. The costs for each participant are €60.  If you are interested in joining the company visit\, please sign up not later than 1st of may 2026. The number of participants is limited to 50. \nDate: 28 & 29 May 2026 \nTime: leaving around noon on the 28th of May\, back at the 29th late in the evening \nCosts: €60 \nRegistration: KWS company visit 2026 – Fill out form \nDeadline: 1st of May 2026 \nParticipants: Max 50. \n 
URL:https://graduateschool-eps.info/event/kws-company-visit/
CATEGORIES:EPS courses,Recurring events incidental
ATTACH;FMTTYPE=image/jpeg:https://graduateschool-eps.info/wp-content/uploads/2026/04/kwsvisit-cropped-scaled.jpg
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BEGIN:VEVENT
DTSTART;TZID=Europe/Amsterdam:20260420T140000
DTEND;TZID=Europe/Amsterdam:20260420T170000
DTSTAMP:20260604T232319Z
CREATED:20251222T105451Z
LAST-MODIFIED:20260604T232319Z
UID:5262-1776693600-1776704400@graduateschool-eps.info
SUMMARY:Workshop: Biosynthesis of Natural Products – From Genes to Molecules to Data
DESCRIPTION:Date: 20 April 2026 (14:00–17:00 + borrel afterwards)\nLocation: Room B9210+B9211\,  Aurora building nr. 127\, Wageningen Campus\nInstructors:  Joelle Mergola Greef (LU) · Barbara Terlouw (WUR) · Esteban Charria Girón (WUR)\nAudience: Wageningen University & Research / Affiliated institutes (max. 50 participants)\nRegistration: open (deadline 13 April)\nContact: Esteban Charria Girón (esteban.charriagiron@wur.nl) \nLearning goals\nBy the end of the workshop\, participants will: \n\nRecognize the core logic of assembly-line biosynthesis for polyketide\, nonribosomal peptide\, RiPP\, terpene\, and hybrids.\nInterpret basic biosynthetic gene cluster (BGC) architectures and infer likely building blocks and tailoring steps.\nFormulate simple experimental set ups to test biosynthetic hypotheses.\nIdentify bioinformatics tools for natural products discovery available at BIF (e.g. genome mining\, biosynthesis-informed fingerprints\, knowledge graphs).\n\nProgram (14:00–17:00)\n14:00–14:10 – Welcome & framing: “From genes to molecules to data”: Short welcome\, practical information\, and introductions of the three instructors. Brief audience poll (wet-lab vs computational vs both)\, workshop expectations\, and an overview of the storyline: from biosynthetic gene clusters to molecules\, data & AI\, and back. \n14:10–14:30 – Lightning pitches: Selected lightning talks from participants (5 talks x 4 min each). Each pitch briefly answers: \n\nWhat are you working on?\nHow does natural products biosynthesis play a role in your work?\nOne concrete question or challenge you have (one slide).\n\n14:30–15:30 – Three perspectives\, one pipeline \n1) Chemical logic of biosynthesis: Going over the building blocks and substrates employed in different pathways (acetyl/malonyl units\, amino acids\, isoprene units\, shikimate-derived intermediates\, etc.). Typical reactions in natural product biosynthesis: C–C and C–N bond formation\, redox chemistry\, and tailoring reactions. Also explain how the “same” chemistry is wired differently in Bacteria\, fungi\, and plants. \n2) Experimental hooks & what we actually see: How can we translate biosynthetic insights into real experiments: \n\nScreening and untargeted metabolomics (What is there?).\nWhat you expect to see in LC-MS/MS experiments for a PKS vs NRPS product.\nTypical follow-up experiments: feeding experiments\, co-culture\, mutants\, overexpression.\nHeterologous expression of target BGCs and what can go wrong (e.g. shunt products or side pathways in host).\n\n3) Anecdotes of NP discoveries – From bioinformatics to experimental data and back: How genome mining tools identify signatures of the chemistry just discussed (domain architectures\, motifs\, “biosynthetic fingerprints”) and how ML/fingerprints/knowledge graphs\, together with core reference databases (e.g. MIBiG\, MITE\, NPAtlas\, and others)\, can support discovery – illustrated via concrete stories: \n\nHow genome mining + pathway logic guided biosynthetic pathway elucidation for tridecaptin and marushamycin.\nCollaborative biosynthesis / oligomerization\, showing how BGC predictions\, MS/MS data and context-dependent expression come together.\nNocardichelin biosynthesis and lipopeptide discovery guided by Harvest.\n\n15:20–15:35 – Mini panel Q&A: Joint Q&A with all three instructors \n15:35–15:45 – Coffee / tea break \n15:45–16:45 – Rotating mini-workshops (3 stations): Participants are divided into three groups (A\, B\, C). Each group visits all three stations in rotation (~20 minutes per station\, plus short changeovers). \nStation 1 — Reading BGCs like a map: Participants work with printed BGC cartoons (PKS\, NRPS\, hybrid) and: \n\nIdentify the biosynthetic class and building blocks.\nDiscuss the roles of key tailoring enzymes.\n\nStation 2 — From phenotype to molecules: Using a case study (e.g. antibiotic discovery)\, groups see figures (inhibition data or FERMO output) and: \n\nPropose what biosynthetic class might be involved (based on MS/MS and BGC results).\nSuggest follow-up experiments to test their hypotheses.\n\nStation 3 — Tools & AI: Demo or screenshots of BGC-to-compound prediction (RetroMol and Harvest)\, biosynthesis-informed fingerprints and knowledge graph concepts. Short exercise in which participants discuss how two example molecules might be represented and connected in such a system. \n16:45–17:00 – Wrap-up: Final recap of key messages and practical information about slides/materials\, tools\, and any mailing list or follow-up activities. \nBorrel & networking (from 17:00)\nInformal borrel after the workshop\, offering time for networking and follow-up discussions. Participants are encouraged to connect across groups and disciplines\, and to explore potential collaborations within the WUR and friends ecosystem. \nFee\nThe fee for this workshop for all participants is € 50\,- \nCancellation\nYou may cancel free of charge up to two weeks before the start of the course. After this date you will be charged the participation fee. In case of a no-show you will be charged the participation fee with an added € 50\,- cancellation fee. \nRegistration
URL:https://graduateschool-eps.info/event/workshop-biosynthesis-of-natural-products-from-genes-to-molecules-to-data/
LOCATION:Aurora building\, Wageningen Campus\, Vijfde Polder 1\, Wageningen\, 6708 WC
CATEGORIES:EPS courses,Recurring events incidental
ORGANIZER;CN="WUR Bioinformatics":MAILTO:esteban.charriagiron@wur.nl
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BEGIN:VEVENT
DTSTART;TZID=Europe/Amsterdam:20251015T093000
DTEND;TZID=Europe/Amsterdam:20251015T170000
DTSTAMP:20260604T233244Z
CREATED:20250909T083603Z
LAST-MODIFIED:20260604T233244Z
UID:4729-1760520600-1760547600@graduateschool-eps.info
SUMMARY:EPS Career Event
DESCRIPTION:The EPS Career Day\, taking place on the 15th of October\, is an event that aims to provide PhD candidates with career perspectives and paths that lie outside of academia. Through workshops\, invited speakers\, and career perspectives\, this event will offer insight into alternative career paths and how to leverage the skills that we acquire as PhDs to apply them to our future job prospects. \nDate: 15 October 2025\n \nTime: 09:30 – 17:00\n \nLocation: Forum\, Campus\, Wageningen University and Research\n \nFee: \nEPS PhD students with approved TSP: \n€35 Afteroon session including lunch and drinks\n€65 whole day \nAll others: \n€65 Afternoon session including lunch and drinks\n€100 whole day \nThere is a no-show fee of €100.  \n \nWorkshops: \n\nHow to pitch yourself\n\nIdentify your transferable skills.\n\nRegistration deadline: 5th of October 2025\, registration now closed
URL:https://graduateschool-eps.info/event/eps-career-event/
LOCATION:Wageningen Campus\, Droevendaalsesteeg 4\, Wageningen\, Gelderland\, 6708 PB\, Netherlands
CATEGORIES:EPS meetings,Recurring events incidental
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