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X-WR-CALDESC:Events for Graduate School EPS
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DTSTART;VALUE=DATE:20250601
DTEND;VALUE=DATE:20250607
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CREATED:20250515T094703Z
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UID:3616-1748736000-1749254399@graduateschool-eps.info
SUMMARY:EMBL course: Whole transcriptome data analysis
DESCRIPTION:This course will teach biological researchers how to analyse biological data sets using open-source software. Most of the analysis will be performed with docker4seq and rCASC packages\, which were developed to facilitate the use of computing demanding applications in the field of NGS data analysis. Docker4seq and rCASC packages use docker containers that embed demanding computing tasks (e.g. short reads mapping) into isolated containers. \nThis approach provides multiple advantages: the user does not need to install all the software on its local server\, the results generated by different containers can be organised in pipelines\, and reproducible research is guarantee by the possibility of sharing the docker images used for the analysis. \nComputers for hands-on exercises will be provided along with demo data sets.
URL:https://graduateschool-eps.info/event/embl-course-whole-transcriptome-data-analysis/
LOCATION:EMBL Advanced Training Centre\, Meyerhogstrasse 1\, Heidelberg\, 69117\, Germany
CATEGORIES:External courses
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BEGIN:VEVENT
DTSTART;VALUE=DATE:20250615
DTEND;VALUE=DATE:20250721
DTSTAMP:20250515T142226Z
CREATED:20250515T095758Z
LAST-MODIFIED:20250515T142226Z
UID:3622-1749945600-1753055999@graduateschool-eps.info
SUMMARY:EMBL course: Imaging-based spatial-omics
DESCRIPTION:The aim of the course is to provide participants a comprehensive introduction to the various methods of spatial-omics and in particular those of multiplex immunofluorescence and spatial transcriptomics. We want to provide a general overview of the methods and assist researchers choose the right method for their needs. \nWith hands-on practicals\, the course will teach participants how to carry out open-source imaging-based methods for cost-effective spatial transcriptomics and multiplex immunofluorescence. The course will cover all experimental stages\, including custom reagent preparation\, sample preparation and data acquisition (with various microscopy modalities) as well as image processing and basic data analysis.
URL:https://graduateschool-eps.info/event/embl-course-imaging-based-spatial-omics/
LOCATION:EMBL Advanced Training Centre\, Meyerhogstrasse 1\, Heidelberg\, 69117\, Germany
CATEGORIES:External courses
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BEGIN:VEVENT
DTSTART;VALUE=DATE:20250616
DTEND;VALUE=DATE:20250621
DTSTAMP:20250515T142218Z
CREATED:20250515T100113Z
LAST-MODIFIED:20250515T142218Z
UID:3626-1750032000-1750463999@graduateschool-eps.info
SUMMARY:EMBL course: Data science for life scientists
DESCRIPTION:This course will introduce life scientists to practical data science topics used in life sciences\, such as data handling and visualisation\, statistical analysis\, application of AI\, and use of publicly available databases. \nYou will initially be introduced to data science theory and practice\, including best practices for undertaking analyses\, data management\, and reproducibility. \nThe course will provide hands-on training in tools and resources appropriate to your research\, including introducing the use of Python for handling and visualising data\, statistical analysis\, and the application of machine learning.
URL:https://graduateschool-eps.info/event/embl-course-data-science-for-life-scientists/
LOCATION:EMBL’s European Bioinformatics Institute (EMBL-EBI)\, Campus\, EMBL-EBI Main Building\, \, Wellcome Genome\, Hinxton\, CB10 1SD\, United Kingdom
CATEGORIES:External courses
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BEGIN:VEVENT
DTSTART;VALUE=DATE:20250624
DTEND;VALUE=DATE:20250627
DTSTAMP:20250515T142201Z
CREATED:20250515T121559Z
LAST-MODIFIED:20250515T142201Z
UID:3664-1750723200-1750982399@graduateschool-eps.info
SUMMARY:EMBL course: Data visualisation for biology
DESCRIPTION:This course will give insights into\, and practical experience in\, data visualisation for exploring complex and multi-dimensional biological data. \nBiological and life sciences data often consists of multiple dimensions: a combination of numerical values\, ordered data\, categories\, and time-series. To make sense of this data\, simple plots like scatterplots\, barcharts\, and boxplots are often not enough. Still\, visualisation is critical in gaining deep insight into the data. This is why many custom visualisations originated in the biological field. \nIn this course\, we will dive into the topic of visualisation of complex biological data and how it can be used to gain insight into and get a “feel” for a dataset\, so that targeted analyses can be defined. It will be delivered through a mixture of lectures and workshop sessions\, and will provide hands-on experience in developing visualisations. The course will focus on working with omics (e.g. genomics\, transcriptomics) data rather than e.g. imaging data.
URL:https://graduateschool-eps.info/event/embl-course-data-visualisation-for-biology/
LOCATION:EMBL’s European Bioinformatics Institute (EMBL-EBI)\, Campus\, EMBL-EBI Main Building\, \, Wellcome Genome\, Hinxton\, CB10 1SD\, United Kingdom
CATEGORIES:External courses
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